Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015794452.1_cds_XP_016438809.1_3357
CDS Infomation

[gene=LOC107764711] [db_xref=GeneID:107764711] [protein=activating signal cointegrator 1 complex subunit 2-like isoform X2] [protein_id=XP_016438809.1] [location=join(102045..102050,102766..102849,111086..111199,112118..112183,112506..112603,112962..113401,113849..114936)] [gbkey=CDS]
Sequence

ATGCAGGAAAAGAAGTTGCTTGATTTACCAAAGTTATTAGACATATGTGCCATATATGGT
CATGAAAATGAAGATCTGACAAGAATATTGGTCTTCAATGCCATAAAGTCACAGCCATGG
ATCCATGATGATCTTTCATCTGTTATTTCGCACTTTCTTAGCATCGTGCAGACTATGTAT
CAGAGGTGTACATCATCGTTAGAGGTTTTATTTTCCTCTGGTCACTTGCAAGATCATGGG
CACAATCGACTTCAAACAGACTATCTAGAGGTGATGGACTTCTTAAATGATGCTGTGGTA
TCTATGGATGCGTTTGTCAATGCGTATAAGCAAGCATCCATCTACTTCTGCTGTCCTGTT
GAAATGAGTCATGGGAATGAGGAGGTGCTTACTACGCTTGCAAGATTACATGATTCATTG
CTGCCCTCTTTGCGGCGGGGTTTCCACATTATTTTAACCTCTGGAAAGAAAGGTTTGACG
GAATCATCTAATGAAATGCGCTCAAATGTTTTTGTCAGTCTCAAAATGTTATCCGCAAGG
ATAGTAAATTTTGGTTGGAAGCTGCTGAACTTGTGCTATCTAAGTGATGAGGCTTTTGTT
GAAAGTTCTCCTCTTCCTGCAACCATGAAGATGTTCCCTACCAATGTGGAGGATCCTGCT
ATAAGAGCAGATATATTAGTGCAGTCAGTGAGGGATATCAGTGGAGATTACTCACAGGCT
CTAGAGGGACGTAGCAAAGGCACATTTCTCCAAGTCATTGACAAAAATCACAACATAATG
AGCAGAATTGAGTTACTACAGAATACAGGGTGGATATCAATGGATGATGATCAATTCAAG
TTTCTGTCGGGGATCATGGTACACCCAGTAGAAGATAATTTTGGAAAGGCAGCCAATCCG
GCAGTCTCCCAAAAGGATAACCAACCACCTGTTGATGAAGACACTGCTATTATGGAGTCA
AAAATAAGTCAAATAAAGGACCTCTTCCCTGATTATGGAAAAGGTTTCTTAGCTGCTTGT
CTCGAAGTATATAACCTAAATCCTGAAGAGGTCATTCAGAGGATTCTTGAGGGTACCCTT
CATGAGGACTTGCAGTCTTTAAACATTTCCTTGGAGAAAATACCACAACCCAAGTCTGGT
GTTCCATCCATGACCAGAAATGATAAGGGTAAAGGGAAACTAGTGGAACCTGCGCCAATG
CCCCCAAGAAACACTATGCCTGCAGCAACCCCATATCAAGCTGAAGGCTCATCTAATTCA
TCTACGACTTCAGTTGGAAGGTTTATCAGGAAAACAACCACTGAAGAACCTGCTTCCTTG
ACACTTGACTCTAGAGATGCAAAGGATTTGGCAAAAACCATTGCACTTTCGTCACAGCTT
GAGTATGAAGATGAGTACGACGACTCATTTGATGACCTAGGTCTAAGTATTGGTGATTCA
GCATTTGAGGAAACTGAGAACCTCCAAGACAAATCAAATTTCGGTCGTGGGAGAACTTAT
GAAGCTGATAACGGTAGCTCAGCTTCCAATGCTTCTAAGTGGGGATCACGAAAAAAGCCA
CAGTTTTACGTCAAAGATGGCAAGAACTACAGCTACAAAGTTGAGGGCTCTGTTGCAGCG
GCTAATTACAATGAAGCTTCTTTAGTAAATCAAGCTCAGAAGGAAATGATACATGGATTG
GGACGAGGAGGTAATCATCCTTTAGGTGCAGTTAAAAGGCTAACTGAGCCAAGCGAGGCG
AAAGATGACGAGCCGGAAACAGATGAGAGTGGTGGAAGGGGGGGAGGTCGTGGGTTCTTC
AGAGGGAGAGGAGGGAGGAGAGGAGGAGGTAGATCAAATCATTACAGAAAGGACCAAGCC
ATGAAAAAACATTTTTCAGGCTTGACAGGCCATTGA

Peptide Sequence

PEP ID

XP_016438809.1
PEP Infomation

PREDICTED: activating signal cointegrator 1 complex subunit 2-like isoform X2 [Nicotiana tabacum]
Sequence

MQEKKLLDLPKLLDICAIYGHENEDLTRILVFNAIKSQPWIHDDLSSVISHFLSIVQTMY
QRCTSSLEVLFSSGHLQDHGHNRLQTDYLEVMDFLNDAVVSMDAFVNAYKQASIYFCCPV
EMSHGNEEVLTTLARLHDSLLPSLRRGFHIILTSGKKGLTESSNEMRSNVFVSLKMLSAR
IVNFGWKLLNLCYLSDEAFVESSPLPATMKMFPTNVEDPAIRADILVQSVRDISGDYSQA
LEGRSKGTFLQVIDKNHNIMSRIELLQNTGWISMDDDQFKFLSGIMVHPVEDNFGKAANP
AVSQKDNQPPVDEDTAIMESKISQIKDLFPDYGKGFLAACLEVYNLNPEEVIQRILEGTL
HEDLQSLNISLEKIPQPKSGVPSMTRNDKGKGKLVEPAPMPPRNTMPAATPYQAEGSSNS
STTSVGRFIRKTTTEEPASLTLDSRDAKDLAKTIALSSQLEYEDEYDDSFDDLGLSIGDS
AFEETENLQDKSNFGRGRTYEADNGSSASNASKWGSRKKPQFYVKDGKNYSYKVEGSVAA
ANYNEASLVNQAQKEMIHGLGRGGNHPLGAVKRLTEPSEAKDDEPETDESGGRGGGRGFF
RGRGGRRGGGRSNHYRKDQAMKKHFSGLTGH

Transcript Sequence

Gene sequence data has not been registered.